CDS

Accession Number TCMCG006C22620
gbkey CDS
Protein Id XP_022554020.1
Location complement(join(66796668..66797025,66797103..66797219,66797310..66797478,66797655..66797796,66798255..66798345,66798459..66798565,66798649..66798795,66799514..66799684,66799849..66799996,66800112..66800231,66800360..66800479,66800604..66800654,66800753..66800868,66801072..66801150,66801316..66801413))
Gene LOC111204098
GeneID 111204098
Organism Brassica napus

Protein

Length 677aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022698299.1
Definition probable rhamnogalacturonate lyase B [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description Rhamnogalacturonate lyase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K18195        [VIEW IN KEGG]
EC 4.2.2.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGAAAAACGGAGCTATTGTAATGAAGATGGCTCGAGTCATGACTCAGGTTTTCGTTCTGATATTTCTTCTTCAAGGTGTTCATTCCCGAACGTCACGAAACAAATCGAATATCGCTAAACCGGGACAAAGCCTCGCATCTCCCCCGGTTACGCTTAAGAAAATTGGCCTTAACCAAGTTGTCGTTGATAATGGTATCATCCAAGTCACCTTCTCGAATCCATCAGGCTTAATAACTGGAATCAAGTATAATGGTTTTAACAATGTGTTGAACGATGAAATCGAGGATCGCGGGTATTGGGATGTAGTATGGTATGAACCAGAAAAAAACCCGCAAACAGATTTTTTGAAAGGAGAAAAAATCGATATTATAAATCAAACAAGTGAGCATGTCGAAATTTCATTTTCAAGAACATGGACTATGGCTCGACGTGGCTCGATAGCCCCATTAAACGTTGATAAAAGATATATTATTCGACGCGGTGTATCTGGAGTGTATATGTACGCTGTGTTAGAGAGGTTAAAAGGATGGCCGCAAGTGGAGATGGACCAAACTAGAATTGTCTTCAAGCTTGACACAACAAAATTCGATTTTATGGCTATATCAGATAATCGGCAGAAAGTTATGCCTTCTGATGCAGATCGAAATATCAACAATGGCATTGCCGCTCCATTGGCTTACAAAGAAGCGGTTCGGTTGATGAATCCACAAAATCATACGCTTAAAGGGCAGGTTGACGATAAGTATATGTACTCGATGGAAAGCAAGGACAACAAAGTACATGGTTGGATCTCTTCTGACCAACGTGTCGGCTTCTGGATGATTACTCCTAGCGATGAGTTCCGTGCTTGTGGGCCCGTCAAACAAGATCTCACTTCTCATGTTGGACCCACCGTACTTTCTATGTTTACAAGTGTACATTACGTGGGAAAAGAAATGAATACAGCTTATGCAAGCAGTGAGCCGTGGAAGAAAATGTTCGGTCCTGTTTTTGTTTATCTCAATTCTCCCTCCTCTAGTGATCTCCTTTGGACGGATGCTAAACGACAGATGGCTGCCGAGGTTCAAAGCTGGCCTTATGACTTCGTGAAGTCAGTTGATTACCCTCTTCACCACCAAAGAGGAACAGTCGAGGGTCAACTATTTGTCACGGACAGTTACAAAAGCAAGTCGAAGTTATACGGGGAGTTTGCTTTTGTGGGTTTAGCACTACCTGGTCAAGCTGGTTCATGGCAAACCGAAAACAAGGGATATCAATTTTGGACACGAGCAGACAAAATGGGGAGGTTCGCAATAGCGAATGTGAGACCAGGAAGTTATAGCCTCTACGCATGGGTTATCGGATTTATTGGAGACTATAAATACGAGCGCGACATTATCATCACACCAGGCAAGGAGATAAACGTAGGACCAATAGTGTACGAGCCGCCAAGAAATGGTCCGACGCTGTGGGAAATCGGGGTACCGGATCGGACCGCAGCAGAATTCAATATTCCAGATCCGGATCCAACCCTTTTGACCAAACTCTATCTTAGTAACGCAAATCCTTCTCAAGACAGATTTAGACAGTATGGTCTATGGAATCGTTACAGTGTTTTGTATCCTCGAAAAGATCTTGTTTTTACTGCTGGAGTAAGTGACTATAAAAAAGATTGGTTCTATGCACATGTCAACAGATATTCTGGAAAAGAGAAATATCAAGCAACGACATGGAAAATAGTGTTCAATTTAAAAACAATGATTAAAACAGGAAATTACACACTTCGAATGGCTTTGGCTGCAGCCACGAATGCGGATTTATTTGTTCGGGTTAACGAAGCTAATTCCAATCCTATTTTCACGAGCGGGTTAATAGGTCGGGATAACGCGATCGCTAGGCATGGAATTCATGGTCTATACAGATTGTACAGTATCGATGTTCAAAGAAAGTTGCTTAGGGTTGGTGATAATACATTTTTTCTTACTCAAAATCGGAATACTAGTTTGTTTACAGGTGTTATGTACGACTATCTTCGTTTGGAAGGTCCATATTAA
Protein:  
MKNGAIVMKMARVMTQVFVLIFLLQGVHSRTSRNKSNIAKPGQSLASPPVTLKKIGLNQVVVDNGIIQVTFSNPSGLITGIKYNGFNNVLNDEIEDRGYWDVVWYEPEKNPQTDFLKGEKIDIINQTSEHVEISFSRTWTMARRGSIAPLNVDKRYIIRRGVSGVYMYAVLERLKGWPQVEMDQTRIVFKLDTTKFDFMAISDNRQKVMPSDADRNINNGIAAPLAYKEAVRLMNPQNHTLKGQVDDKYMYSMESKDNKVHGWISSDQRVGFWMITPSDEFRACGPVKQDLTSHVGPTVLSMFTSVHYVGKEMNTAYASSEPWKKMFGPVFVYLNSPSSSDLLWTDAKRQMAAEVQSWPYDFVKSVDYPLHHQRGTVEGQLFVTDSYKSKSKLYGEFAFVGLALPGQAGSWQTENKGYQFWTRADKMGRFAIANVRPGSYSLYAWVIGFIGDYKYERDIIITPGKEINVGPIVYEPPRNGPTLWEIGVPDRTAAEFNIPDPDPTLLTKLYLSNANPSQDRFRQYGLWNRYSVLYPRKDLVFTAGVSDYKKDWFYAHVNRYSGKEKYQATTWKIVFNLKTMIKTGNYTLRMALAAATNADLFVRVNEANSNPIFTSGLIGRDNAIARHGIHGLYRLYSIDVQRKLLRVGDNTFFLTQNRNTSLFTGVMYDYLRLEGPY